The detailed information of tRNA gene sequence


Sequence ID>W1910573257
Genome IDJOTA01000023
Search identical group
Phylum/ClassNitrososphaerota
SpeciesMarine Group I thaumarchaeote SCGC AAA799-B03 [JOTA]
Start position on genome 7628
End posion on genome 7711
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
catgttaatT
tRNA gene sequence 
GCCGGGGTAGCCAAGTGGTAAGGCGGCCGTCTCGAAAACGGCTACGCGCAAGCGTGCAGG
GGTTCGAGTCCCTTTCCCGGCGTgt
Downstream region at tRNA end position 
ttataatttt
Secondary structure (Cloverleaf model)
>W1910573257	Ser	CGA
                   T      GTgt ttataatttt
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C
                     G + T          T G
                    T     T T C C C     A
        G A        A      | + | | |     G
      T     A C C G       A G G G G     C
      G       | | |                 T T
      G     A G G C
        T A        G     TACGCGCAAGCGTGC
                    G - C
                    C - G
                    C - G
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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