The detailed information of tRNA gene sequence


Sequence ID>W1910573263
Genome IDJOTB01000001
Search identical group
Phylum/ClassNitrososphaerota
SpeciesMarine Group I thaumarchaeote SCGC AAA799-D07 [JOTB]
Start position on genome 44539
End posion on genome 44614
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
gattttcatT
tRNA gene sequence 
GGGCCGGTCGTCTAGACTGGTAGGATACGCCCTTGGCATGGGTGAGATCGAGGGTTCAAA
TCCCTCCCGGTCCATta
Downstream region at tRNA end position 
ctgttttttg
Secondary structure (Cloverleaf model)
>W1910573263	Ala	GGC
                   T      ATta ctgttttttg
                     G - C
                     G - C
                     G + T
                     C - G
                     C - G
                     G - C
                     G - C          T A
                    T     C T C C C     A
      A G A        C      | | | | |     A
    C       T C T G       G A G G G     C
    T       + | | +                 T T
    G       G G A T
      G T A        A     AGATC
                    C - G
                    G + T
                    C - G
                    C - G
                    C - G
                  T       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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