The detailed information of tRNA gene sequence


Sequence ID>W1910573274
Genome IDJOTC01000001
Search identical group
Phylum/ClassNitrososphaerota
SpeciesMarine Group I thaumarchaeote SCGC AAA799-O18 [JOTC]
Start position on genome 29819
End posion on genome 29893
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
tttttactgc
tRNA gene sequence 
GGTGAGGTAGTACAGTCCGGTAGTGCATGGGCCTGCAAAGCCCAGAGTCGGGGGTTCAAA
TCCCTCTCTCACCTCtt
Downstream region at tRNA end position 
tgatcttggt
Secondary structure (Cloverleaf model)
>W1910573274	Cys	GCA
                   c      TCtt tgatcttggt
                     G - C
                     G - C
                     T - A
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     C T C C C     A
      T G A        A      | + | | |     A
    C       C A T G       G G G G G     C
    C       | | + |                 T T
    G       G T G C
      G T A        A     GAGTC
                    T - A
                    G - C
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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