The detailed information of tRNA gene sequence


Sequence ID>W1910573289
Genome IDJOTD01000022
Search identical group
Phylum/ClassNitrososphaerota
SpeciesMarine Group I thaumarchaeote SCGC RSA3 [JOTD]
Start position on genome 1959
End posion on genome 1887
Amino Acid Gln
Anticodon TTG
Upstream region at tRNA start position 
tcgatttagc
tRNA gene sequence 
AGCCCGATAGTGTAGAGGTCAAGCATATGGGCCTTTGGAGCCCGTGACGGCAGTTCGAAT
CTGCCTCGGGCTAttt
Downstream region at tRNA end position 
ttttaaaaat
Secondary structure (Cloverleaf model)
>W1910573289	Gln	TTG
                   c      Attt ttttaaaaat
                     A - T
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C
                     A - T          T A
                    T     C C G T C     A
      A G A        A      | | | | |     G
    G       T G T G       G G C A G     C
    G       + | | +                 T T
    T       G C A T
      C A A        A     TGAC
                    T + G
                    G - C
                    G - C
                    G - C
                    C - G
                  C       A
                  T       G
                    T T G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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