The detailed information of tRNA gene sequence


Sequence ID>W1910573296
Genome IDJOTD01000033
Search identical group
Phylum/ClassNitrososphaerota
SpeciesMarine Group I thaumarchaeote SCGC RSA3 [JOTD]
Start position on genome 42945
End posion on genome 43019
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
ttctgaatat
tRNA gene sequence 
GGGCCGGTCGTCTAGTCTGGTAGGATAGGTGCATGGCATGCATCGGATCAAGGGTTCAAA
TCCCTTCCGGTCCACta
Downstream region at tRNA end position 
tttctttttt
Secondary structure (Cloverleaf model)
>W1910573296	Ala	GGC
                   t      ACta tttctttttt
                     G - C
                     G - C
                     G + T
                     C - G
                     C - G
                     G - C
                     G - C          T A
                    T     T T C C C     A
      T G A        C      | | | | |     A
    C       T C T G       A A G G G     C
    T       + | | +                 T T
    G       G G A T
      G T A        A     GGATC
                    G - C
                    G + T
                    T - A
                    G - C
                    C - G
                  A       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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