The detailed information of tRNA gene sequence


Sequence ID>W1910573311
Genome IDJOTD01000068
Search identical group
Phylum/ClassNitrososphaerota
SpeciesMarine Group I thaumarchaeote SCGC RSA3 [JOTD]
Start position on genome 3787
End posion on genome 3701
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ccatctttgt
tRNA gene sequence 
GCGGGGATCGCCTAGCCTGGTAGGGCGTGGGATTGCTAATCCCATGTCCGCAAGGACACG
GGGGTTCAAATCCCCCTCCCCGCGCCA
Downstream region at tRNA end position 
ttaaaactta
Secondary structure (Cloverleaf model)
>W1910573311	Ser	GCT
                   t      GCCA ttaaaactta
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     C C C C C     A
      C G A        C      | | | | |     A
    C       T C C G       G G G G G     C
    T       + | | |                 T T
    G       G G G C
      G T A        G     TGTCCGCAAGGACAC
                    T - A
                    G - C
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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