The detailed information of tRNA gene sequence


Sequence ID>W1910573316
Genome IDJOTD01000094
Search identical group
Phylum/ClassNitrososphaerota
SpeciesMarine Group I thaumarchaeote SCGC RSA3 [JOTD]
Start position on genome 1621
End posion on genome 1697
Amino Acid Asn
Anticodon GTT
Upstream region at tRNA start position 
aaaattatgt
tRNA gene sequence 
GCCGCCCTAGCTCAGCGTGGTAGAGCATCCGACTGTTAATCGGACGGTCGTCAGTTCAAG
TCTGATGGGCGGCGCCA
Downstream region at tRNA end position 
ttttgaaaat
Secondary structure (Cloverleaf model)
>W1910573316	Asn	GTT
                   t      GCCA ttttgaaaat
                     G - C
                     C - G
                     C - G
                     G - C
                     C - G
                     C - G
                     C - G          T G
                    T     T A G T C     A
      C G A        A      + | | | |     A
    G       C T C G       G T C A G     C
    T       | | | |                 T T
    G       G A G C
      G T A        A     CGGTC
                    T - A
                    C - G
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    G T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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