The detailed information of tRNA gene sequence


Sequence ID>C09100405
Genome IDCP001219
Search identical group
Phylum/ClassAcidithiobacillia
SpeciesAcidithiobacillus ferrooxidans ATCC 23270 [CP001219]
Start position on genome 1028227
End posion on genome 1028140
Amino Acid Leu
Anticodon CAG
Upstream region at tRNA start position 
agtatccacc
tRNA gene sequence 
GCCTCTATGGTGAAACGGTAAACGCGCCGGCCTCAGAAGCCGGAGCCATCAACATGGCAT
GCAGGTTCGAGTCCTGCTAGGGGCACCA
Downstream region at tRNA end position 
ttattattgg
Secondary structure (Cloverleaf model)
>C09100405	Leu	CAG
                   c      ACCA ttattattgg
                     G - C
                     C - G
                     C - G
                     T + G
                     C - G
                     T - A
                     A - T          T G
                    T     C G T C C     A
      C A A        G      | | | | |     G
    G       A G T G       G C A G G     C
    G         | + |                 T T
    T       A C G C
      A A          G     AGCCATCAACATGGCAT
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    C A G
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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