The detailed information of tRNA gene sequence


Sequence ID>W1910597189
Genome IDLAHJ01000027
Search identical group
Phylum/ClassCyanobacteriota
SpeciesNostoc linckia z18 [LAHJ]
Start position on genome 48750
End posion on genome 48664
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
cagtttattT
tRNA gene sequence 
GGAGAGGTGGCAGAGTGGTCGATTGCGTCCGACTTGAAATCGGATGAACCGAAAGGTTCC
GGGAGTTCGAATCTCCCCTTCTCCGTtg
Downstream region at tRNA end position 
aaagtttaaa
Secondary structure (Cloverleaf model)
>W1910597189	Ser	TGA
                   T      GTtg aaagtttaaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G + T
                     G - C          T A
                    T     C C C T C     A
      T G A        G      | | | | |     G
    G       G A C G       G G G A G     C
    G       + | | |                 T T
    T       T T G C
      C G A        G     TGAACCGAAAGGTTCC
                    T - A
                    C - G
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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