The detailed information of tRNA gene sequence


Sequence ID>W1910599125
Genome IDLCWN02000016
Search identical group
Phylum/ClassThermoproteota
SpeciesVulcanisaeta sp. EB80 [LCWN]
Start position on genome 33635
End posion on genome 33730
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
acaatatatc
tRNA gene sequence 
GGGCCCGTAGCTCAGCAAGGTCCAGAGCGGCGGGCTCCAGAGCCGTATGGCGAAGCTACC
CGTAGGTCGTGGGTTCAAATCCCACCGGGCCCACCA
Downstream region at tRNA end position 
tgaatcttgt
Secondary structure (Cloverleaf model)
>W1910599125	Trp	CCA
                   c      ACCA tgaatcttgt
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     C A C C C     A
    A C G A        A      | | | | |     A
  A         C T C G       G T G G G     C
  G         | | | |                 T T
  G         G A G C
    T C C A        G     ATGGCGAAGCTACCCGTAGGTC
                    G + T
                    C - G
                    G - C
                    G - C
                    G   G
                  C       A
                  T       G *
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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