The detailed information of tRNA gene sequence


Sequence ID>C09103188
Genome IDCP001277
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesCandidatus Hamiltonella defensa 5AT [Acyrthosiphon pisum] T5A [CP001277]
Start position on genome 1443662
End posion on genome 1443578
Amino Acid Leu
Anticodon CAA
Upstream region at tRNA start position 
ttttctcagt
tRNA gene sequence 
GCCGAAGTGGCGAAATTGGTAGACGCAGTTGACTCAAAATCAACCGCTTTCGGGTGTGCC
GGTTCGAGTCCGGCCTTCGGCACCA
Downstream region at tRNA end position 
gtatctagtc
Secondary structure (Cloverleaf model)
>C09103188	Leu	CAA
                   t      ACCA gtatctagtc
                     G - C
                     C - G
                     C - G
                     G - C
                     A - T
                     A - T
                     G - C          T G
                    T     C G G C C     A
      T A A        G      | | | | |     G
    T       A G C G       G C C G G     C
    G         | | |                 T T
    G       A C G C
      T A G        A     CGCTTTCGGGTGT
                    G - C
                    T - A
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    C A A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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