The detailed information of tRNA gene sequence


Sequence ID>W1910636855
Genome IDLPWH01000005
Search identical group
Phylum/ClassSpirochaetota
SpeciesAlkalispirochaeta sphaeroplastigenens JC133 [LPWH]
Start position on genome 11046
End posion on genome 10974
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
ccttgcacgg
tRNA gene sequence 
GTCTCCTTCGTCTAGTGGTTAGGACACCGGGTTTTCATCCCGGCAACGCGGGTTCGATCC
CCGCAGGAGATGCtt
Downstream region at tRNA end position 
tcagacccct
Secondary structure (Cloverleaf model)
>W1910636855	Glu	TTC
                   g      GCtt tcagacccct
                     G + T
                     T - A
                     C - G
                     T - A
                     C - G
                     C - G
                     T - A          C T
                    T     C G C C C     A
      T G A        C      | | | | |     G
    G       T C T G       G C G G G     C
    G       + | | |                 T T
    T       G G A C
      T A          A     CAAC
                    C - G
                    C - G
                    G - C
                    G - C
                    G - C
                  T       T
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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