The detailed information of tRNA gene sequence


Sequence ID>W1910636875
Genome IDLPWH01000117
Search identical group
Phylum/ClassSpirochaetota
SpeciesAlkalispirochaeta sphaeroplastigenens JC133 [LPWH]
Start position on genome 48398
End posion on genome 48474
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
cgttttttaT
tRNA gene sequence 
AGGCCAGTAGCTCCAATTGGTAGAGCGCCGGTCTCCAAAACCGGATGTTGCGGGTTCGAA
TCCTGCCTGGCCTGTCt
Downstream region at tRNA end position 
ctcgccggga
Secondary structure (Cloverleaf model)
>W1910636875	Trp	CCA
                   T      GTCt ctcgccggga
                     A - T
                     G - C
                     G - C
                     C - G
                     C - G
                     A - T
                     G - C          T A
                    T     C G T C C     A
      A A C        A      | | + | |     G
    T       C T C G       G C G G G     C
    T       | | | |                 T T
    G       G A G C
      G T A        G     ATGTT
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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