The detailed information of tRNA gene sequence


Sequence ID>C09107455
Genome IDCP001298
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesMethylorubrum extorquens CM4 [CP001298]
Start position on genome 733111
End posion on genome 733027
Amino Acid Leu
Anticodon CAA
Upstream region at tRNA start position 
cgcgtgcgtc
tRNA gene sequence 
GCGGGTATGGCGGAATTGGTAGACGCGGGCGACTCAAAATCGCCAGCCGAAAGGCGTGGG
GGTTCGATTCCCTCTACCCGCACCA
Downstream region at tRNA end position 
gccctcccca
Secondary structure (Cloverleaf model)
>C09107455	Leu	CAA
                   c      ACCA gccctcccca
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     T - A
                     A - T          T T
                    T     C T C C C     A
      T A A        G      | + | | |     G
    T       G G C G       G G G G G     C
    G         | | |                 T T
    G       A C G C
      T A G        G     AGCCGAAAGGCGT
                    G - C
                    G - C
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    C A A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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