The detailed information of tRNA gene sequence


Sequence ID>C09107629
Genome IDCP001510
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesMethylorubrum extorquens AM1 [CP001510]
Start position on genome 2266247
End posion on genome 2266161
Amino Acid Leu
Anticodon TAA
Upstream region at tRNA start position 
ctgcgcccat
tRNA gene sequence 
GCGGACGTGGCGAAACCGGTAGACGCACGAGACTTAAAATCTTGCGGCCGCAAGGCTGTG
CGGGTTCGAGTCCCGCCGTCCGCACCA
Downstream region at tRNA end position 
attttttgga
Secondary structure (Cloverleaf model)
>C09107629	Leu	TAA
                   t      ACCA attttttgga
                     G - C
                     C - G
                     G - C
                     G - C
                     A - T
                     C - G
                     G - C          T G
                    T     C G C C C     A
      C A A        G      | | | | |     G
    C       A G C G       G C G G G     C
    G         | | |                 T T
    G       A C G C
      T A G        A     CGGCCGCAAGGCTGT
                    C - G
                    G + T
                    A - T
                    G - C
                    A - T
                  C       A
                  T       A
                    T A A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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