The detailed information of tRNA gene sequence


Sequence ID>W1910646869
Genome IDLXJS01000065
Search identical group
Phylum/ClassVerrucomicrobiota
SpeciesCandidatus Methylacidiphilum fumarolicum Fur [LXJS]
Start position on genome 26888
End posion on genome 26976
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
aataagcact
tRNA gene sequence 
GGACAGATGCCGGAGTGGTTGATCGGGCACGCCTGGAGAGCGTGTAGTCGGCTAAACCGA
CTCGAGGGTTCGAATCCCTCTCTGTCCGCtt
Downstream region at tRNA end position 
tgtttccttg
Secondary structure (Cloverleaf model)
>W1910646869	Ser	GGA
                   t      GCtt tgtttccttg
                     G - C
                     G - C
                     A - T
                     C - G
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G G C C       G A G G G     C
    G       + | | |                 T T
    T       T C G G
      T G A        G     TAGTCGGCTAAACCGACTC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       G
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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