The detailed information of tRNA gene sequence


Sequence ID>W1910657168
Genome IDMAPF01000056
Search identical group
Phylum/ClassMycoplasmatota
SpeciesNew Jersey aster yellows phytoplasma aster yellows phytoplasma NJAY [MAPF]
Start position on genome 5393
End posion on genome 5302
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
atataattta
tRNA gene sequence 
GGAGTAGTACTCAAGTGGCTATAAGAGGCGTCCCTGCTAAGGACGTAGTCCGAGAAATCG
GTTCAAGGGTTCGAATCCCTTCTACTCCGCCA
Downstream region at tRNA end position 
ttttaaattt
Secondary structure (Cloverleaf model)
>W1910657168	Ser	GCT
                   a      GCCA ttttaaattt
                     G - C
                     G - C
                     A - T
                     G - C
                     T - A
                     A - T
                     G - C          T A
                    T     T T C C C     A
    G T G A        A      | | | | |     G
  G         A C T C       A A G G G     C
  C           | | |                 T T
  T         A G A G
    A T A          G     TAGTCCGAGAAATCGGTTC
                    C - G
                    G - C
                    T - A
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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