The detailed information of tRNA gene sequence


Sequence ID>C09111130
Genome IDCP001636
Search identical group
Phylum/ClassBetaproteobacteria
SpeciesVariovorax paradoxus [CP001636]
Start position on genome 892519
End posion on genome 892435
Amino Acid Leu
Anticodon CAG
Upstream region at tRNA start position 
aatggaacca
tRNA gene sequence 
CCCCCGATGGCGGAATCGGTAGACGCACCGGTCTCAGAAACCGGGGACGAAAGTCATGCA
AGTTCGAGGCTTGCTTGGGGGACCA
Downstream region at tRNA end position 
ccagcttctt
Secondary structure (Cloverleaf model)
>C09111130	Leu	CAG
                   a      ACCA ccagcttctt
                     C - G
                     C - G
                     C - G
                     C - G
                     C - G
                     G + T
                     A - T          G G
                    T     C G T T C     A
      T A A        G      | | | | |     G
    C       G G C G       G C A A G     C
    G         | | |                 T T
    G       A C G C
      T A G        A     GGACGAAAGTCAT
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C A G
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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