The detailed information of tRNA gene sequence


Sequence ID>W1910697295
Genome IDMEKN01000028
Search identical group
Phylum/ClassAcidobacteriota
SpeciesAcidobacteria bacterium RIFCSPHIGHO2_02_FULL_67_57 [MEKN]
Start position on genome 2443
End posion on genome 2343
Amino Acid Sec
Anticodon TCA
Upstream region at tRNA start position 
ttttttcggC
tRNA gene sequence 
GGAGGGGTGCAGGGTCCGGTGATTCTCCCGGCCTTCAAAGCCGGTGGTCCTTCGGCGAAC
GCCGGGGGACGATGGGTTCGACTCCCATACCCTTCCGCC
Downstream region at tRNA end position 
Acactgtaga
Secondary structure (Cloverleaf model)
>W1910697295	Sec	TCA
                   C      CGCC Acactgtaga
                     G - C
                     G + T
                     A - T
                     G - C
                     G - C
                     G - C
                     G   A          T C
                    T     T A C C C     A
      C T G        G      | | | | |     G
    C       G G A C       A T G G G     C
    G       + +                     T T
    G       T T C T
      T G A        C     TGGTCCTTCGGCGAACGCCGGGGGACG
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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