The detailed information of tRNA gene sequence


Sequence ID>W1910697364
Genome IDMEKQ01000039
Search identical group
Phylum/ClassAcidobacteriota
SpeciesAcidobacteria bacterium RIFCSPLOWO2_02_FULL_60_20 [MEKQ]
Start position on genome 7660
End posion on genome 7563
Amino Acid Sec
Anticodon TCA
Upstream region at tRNA start position 
aatcgccatc
tRNA gene sequence 
GGAAGCGAAACTGGTCTGGTGACTGGCCTGGACTTCAAATCCAGTGGTTCTTCTCCTTGG
AGGGGAACGATGGGTTCGATTCCCATACGCTTCCGCCA
Downstream region at tRNA end position 
aactcgcgca
Secondary structure (Cloverleaf model)
>W1910697364	Sec	TCA
                   c      GCCA aactcgcgca
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     C - G
                     G - C
                     A   A          T T
                    A     T A C C C     A
      T C T        A      | | | | |     G
    G       G G T C       A T G G G     C
    G       | + + |                 T T
    T       C T G G
      G A          C     TGGTTCTTCTCCTTGGAGGGGAACG
                    C - G
                    T - A
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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