The detailed information of tRNA gene sequence


Sequence ID>W1910697412
Genome IDMEKR01000197
Search identical group
Phylum/ClassAcidobacteriota
SpeciesAcidobacteria bacterium RIFCSPLOWO2_02_FULL_61_28 [MEKR]
Start position on genome 6048
End posion on genome 5953
Amino Acid Sec
Anticodon TCA
Upstream region at tRNA start position 
acggatctac
tRNA gene sequence 
GGAAGAGAATCGCACCCCGGTGGGGCGCCCGGACTTCAAATTCGGCGAGAGGCGTCAGAC
GTCTCTGGTGGGTTCGACTCCCACTCTTTTCCGCCA
Downstream region at tRNA end position 
atattcttga
Secondary structure (Cloverleaf model)
>W1910697412	Sec	TCA
                   c      GCCA atattcttga
                     G - C
                     G - C
                     A - T
                     A - T
                     G + T
                     A - T
                     G - C
                     A - T          T C
                    A     C A C C C     A
      C C C        T      | | | | |     G
    C       A C G C       G T G G G     C
    G         | | |                 T T
    G       G G C G
      T G G        C     CGAGAGGCGTCAGACGTCTCTG
                    C - G
                    C - G
                    G - C
                    G + T
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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