The detailed information of tRNA gene sequence


Sequence ID>W1910697414
Genome IDMEKS01000002
Search identical group
Phylum/ClassAcidobacteriota
SpeciesAcidobacteria bacterium RIFCSPLOWO2_02_FULL_64_15 [MEKS]
Start position on genome 48311
End posion on genome 48404
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
gactaggaga
tRNA gene sequence 
GGTGAGGTGGCCGAGTGGCTGAAGGCGGCGGTTTGCTAAACCGTTGTACGGGCCAAAACC
TGTACCCAGGGTTCGAATCCCTGCCTCACCGCCA
Downstream region at tRNA end position 
gcgcggcgtc
Secondary structure (Cloverleaf model)
>W1910697414	Ser	GCT
                   a      GCCA gcgcggcgtc
                     G - C
                     G - C
                     T - A
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     G T C C C     A
      T G A        G      | | | | |     G
    G       G C C G       C A G G G     C
    G         | | |                 T T
    C       A G G C
      T G A        G     TGTACGGGCCAAAACCTGTACC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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