The detailed information of tRNA gene sequence


Sequence ID>W1910697469
Genome IDMEKT01000102
Search identical group
Phylum/ClassAcidobacteriota
SpeciesAcidobacteria bacterium RIFCSPLOWO2_02_FULL_65_29 [MEKT]
Start position on genome 6363
End posion on genome 6456
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tttctcgcgc
tRNA gene sequence 
GGTGAGGTGGCCGAGAGGCTGAAGGCGGCGGTTTGCTAAACCGTTATACGGGCTAACACC
TGTATCCAGGGTTCGAATCCCTGCCTCACCGCCA
Downstream region at tRNA end position 
gtttagtgcc
Secondary structure (Cloverleaf model)
>W1910697469	Ser	GCT
                   c      GCCA gtttagtgcc
                     G - C
                     G - C
                     T - A
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     G T C C C     A
      A G A        G      | | | | |     G
    G       G C C G       C A G G G     C
    G         | | |                 T T
    C       A G G C
      T G A        G     TATACGGGCTAACACCTGTATC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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