The detailed information of tRNA gene sequence


Sequence ID>W1910697774
Genome IDMELB01000160
Search identical group
Phylum/ClassAcidobacteriota
SpeciesAcidobacteria bacterium RIFCSPLOWO2_12_FULL_66_10 [MELB]
Start position on genome 3038
End posion on genome 3135
Amino Acid Sec
Anticodon TCA
Upstream region at tRNA start position 
tggtctttga
tRNA gene sequence 
GGAAGCGAACGGGTGCCCGGTGGCCCTCCCGGTCTTCAAAATCGGTCGCTCCCCGTTTAC
GCGGGGAGGCTGGGTTCGACTCCCAGGCGCTTCCGCCA
Downstream region at tRNA end position 
tctccaatca
Secondary structure (Cloverleaf model)
>W1910697774	Sec	TCA
                   a      GCCA tctccaatca
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     C - G
                     G - C
                     A   G          T C
                    A     G A C C C     A
      C C G        C      | | | | |     G
    C       T G G G       C T G G G     C
    G         | | +                 T T
    G       C C C T
      T G G        C     TCGCTCCCCGTTTACGCGGGGAGG
                    C - G
                    C - G
                    G - C
                    G + T
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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