The detailed information of tRNA gene sequence


Sequence ID>W1910697903
Genome IDMELF01000015
Search identical group
Phylum/ClassAcidobacteriota
SpeciesAcidobacteria bacterium RIFCSPLOWO2_12_FULL_68_19 [MELF]
Start position on genome 59946
End posion on genome 59852
Amino Acid Sec
Anticodon TCA
Upstream region at tRNA start position 
ggaagcccgc
tRNA gene sequence 
GGAGAAGGAAGGTGCCCGGTGGCGCCGCTGGTCTTCAAAACCAGTCTGGGGTCCGTAAGG
ACCCTGGAGGGTTCGACTCCCTCCCTTCTCCGCCA
Downstream region at tRNA end position 
gccttcgcgt
Secondary structure (Cloverleaf model)
>W1910697903	Sec	TCA
                   c      GCCA gccttcgcgt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     A - T
                     G - C
                     G - C          T C
                    A     C T C C C     A
      C C C        A      | | | | |     G
    G       G T G G       G A G G G     C
    G       | + | |                 T T
    T       C G C C
      G G          G     TCTGGGGTCCGTAAGGACCCTG
                    C - G
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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