The detailed information of tRNA gene sequence


Sequence ID>W1910707309
Genome IDMFHF01000008
Search identical group
Phylum/ClassUnclassified
SpeciesCandidatus Giovannonibacteria bacterium RIFCSPHIGHO2_01_FULL_45_33 [MFHF]
Start position on genome 11979
End posion on genome 12067
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
agtgaaattT
tRNA gene sequence 
GGAGGGTTGGCTGAGCGGTCTAAGGCGCCGGTCTCGAAAACCGGTTGGGGAGCAATCCCC
TCGCAGGTTCAAATCCTGCACCCTCCGAaa
Downstream region at tRNA end position 
gcaaaattcc
Secondary structure (Cloverleaf model)
>W1910707309	Ser	CGA
                   T      GAaa gcaaaattcc
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     T - A          T A
                    T     C G T C C     A
      C G A        G      | | | | |     A
    G       G T C G       G C A G G     C
    G         + | |                 T T
    T       A G G C
      C T A        G     TTGGGGAGCAATCCCCTC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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