The detailed information of tRNA gene sequence


Sequence ID>W1910707427
Genome IDMFHJ01000009
Search identical group
Phylum/ClassUnclassified
SpeciesCandidatus Giovannonibacteria bacterium RIFCSPHIGHO2_02_43_16 [MFHJ]
Start position on genome 4178
End posion on genome 4251
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
atgagagatt
tRNA gene sequence 
GGGGGTGTAGTTTAATGGTAGAACGCTGGTCTCCAAAACCAGCAGTCAGGGTTCGATTCC
TTGCGCCCCCGCCA
Downstream region at tRNA end position 
gaataattgg
Secondary structure (Cloverleaf model)
>W1910707427	Trp	CCA
                   t      GCCA gaataattgg
                     G - C
                     G - C
                     G - C
                     G - C
                     G - C
                     T + G
                     G - C          T T
                    T     G T T C C     A
        A A        A      | | + | |     G
      T     T T T G       C A G G G     C
      G     + | | |                 T T
      G     G A A C
        T A        G     CAGT
                    C - G
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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