The detailed information of tRNA gene sequence


Sequence ID>W1910708174
Genome IDMFIF01000015
Search identical group
Phylum/ClassUnclassified
SpeciesCandidatus Giovannonibacteria bacterium RIFCSPLOWO2_01_FULL_46_32 [MFIF]
Start position on genome 5046
End posion on genome 4957
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
agcgtatcat
tRNA gene sequence 
GGAGACGTGGCTGAGTGGTCGAAAGCGCCTCACTGCTAACGAGGTAGGGTCTAAAAGCCC
TCACTGGTTCGAATCCAGTCGTCTCCGCCA
Downstream region at tRNA end position 
atgaatctga
Secondary structure (Cloverleaf model)
>W1910708174	Ser	GCT
                   t      GCCA atgaatctga
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     C - G
                     G - C          T A
                    T     T G A C C     A
      T G A        G      | | | | |     G
    G       G T C G       A C T G G     C
    G         | | |                 T T
    T       A A G C
      C G A        G     TAGGGTCTAAAAGCCCTC
                    C - G
                    C - G
                    T - A
                    C - G
                    A   C
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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