The detailed information of tRNA gene sequence


Sequence ID>W1910708394
Genome IDMFIM01000019
Search identical group
Phylum/ClassUnclassified
SpeciesCandidatus Giovannonibacteria bacterium RIFCSPLOWO2_02_FULL_45_28 [MFIM]
Start position on genome 17988
End posion on genome 17900
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
gaaacaaacC
tRNA gene sequence 
GGAAGCGTGGCTGAGAGGTTGAAGGCACCGGTCTTGAAAACCGGAAGCTGCGCAAGCGGC
TCGGAGGTTCGAATCCTCCCGCTTCCGGtt
Downstream region at tRNA end position 
tgtttctgag
Secondary structure (Cloverleaf model)
>W1910708394	Ser	TGA
                   C      GGtt tgtttctgag
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     C - G
                     G - C          T A
                    T     C C T C C     A
      A G A        G      | | | | |     G
    G       G T C G       G G A G G     C
    G         + | |                 T T
    T       A G G C
      T G A        A     AAGCTGCGCAAGCGGCTC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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