The detailed information of tRNA gene sequence


Sequence ID>W1910708537
Genome IDMFIR01000004
Search identical group
Phylum/ClassUnclassified
SpeciesCandidatus Giovannonibacteria bacterium RIFCSPLOWO2_12_FULL_44_25 [MFIR]
Start position on genome 39884
End posion on genome 39957
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
aaataaataa
tRNA gene sequence 
CGGGGTGTAGTATACCGGTAGTACGTGCGCTTCGGGTGCGCAAAGACGGAGTTCAATTCT
CCGCACCCCGACCA
Downstream region at tRNA end position 
gttgaaacaa
Secondary structure (Cloverleaf model)
>W1910708537	Pro	CGG
                   a      ACCA gttgaaacaa
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T T
                    T     G C C T C     A
        C A        A      | | | | |     A
      C     T A T G       C G G A G     C
      G     + | | |                 T T
      G     G T A C
        T A        G     AAGA
                    T - A
                    G - C
                    C - G
                    G - C
                    C - G
                  T       T
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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