The detailed information of tRNA gene sequence


Sequence ID>W1910726090
Genome IDMGRA01000165
Search identical group
Phylum/ClassDeltaproteobacteria
SpeciesDeltaproteobacteria bacterium RBG_19FT_COMBO_46_12 [MGRA]
Start position on genome 17283
End posion on genome 17376
Amino Acid Sec
Anticodon TCA
Upstream region at tRNA start position 
gttatattct
tRNA gene sequence 
GGAAGTGGACAGGTTCTGGTGGGCCTCCTGGACTTCAAATCCAGTGACGGGCAGAGATGT
CCGTGGTGGGTTCGATTCCCATGCACTTCCGCCA
Downstream region at tRNA end position 
tcttgtttgg
Secondary structure (Cloverleaf model)
>W1910726090	Sec	TCA
                   t      GCCA tcttgtttgg
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     T - A
                     G - C
                     G   G          T T
                    A     T A C C C     A
      T C T        C      + | | | |     G
    G       T G G A       G T G G G     C
    G       + | | |                 T T
    T       G C C T
      G G          C     TGACGGGCAGAGATGTCCGTG
                    C - G
                    T - A
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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