The detailed information of tRNA gene sequence


Sequence ID>W1910727134
Genome IDMGSH01000003
Search identical group
Phylum/ClassDeltaproteobacteria
SpeciesDeltaproteobacteria bacterium RIFCSPLOWO2_02_FULL_55_12 [MGSH]
Start position on genome 92505
End posion on genome 92594
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
aggcccctac
tRNA gene sequence 
GGAGAGGTGACCGAGAGGCTGAAGGTGGCAGTCTCGAAAACTGCTGTGTCGGAAACGGCA
CCGAGGGTTCAAATCCCTCCCTCTCCGCCA
Downstream region at tRNA end position 
tttttttaac
Secondary structure (Cloverleaf model)
>W1910727134	Ser	CGA
                   c      GCCA tttttttaac
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      A G A        G      | | | | |     A
    G       G C C A       G A G G G     C
    G         | | |                 T T
    C       A G G T
      T G A        G     TGTGTCGGAAACGGCACC
                    G - C
                    C - G
                    A - T
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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