The detailed information of tRNA gene sequence


Sequence ID>W1910727196
Genome IDMGSJ01000057
Search identical group
Phylum/ClassUnclassified
SpeciesDeltaproteobacteria bacterium RIFCSPLOWO2_12_55_13 [MGSJ]
Start position on genome 20749
End posion on genome 20840
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
acgaaaaagt
tRNA gene sequence 
GGAGAGGTGGCCGAGCCCGGTTGAAGGCGCTTGACTCGAAATCAAGTGTGCCCGGAAGGG
CACCGGGGGTTCAAATCCCTCCCTCTCCGCCA
Downstream region at tRNA end position 
aattagataa
Secondary structure (Cloverleaf model)
>W1910727196	Ser	CGA
                   t      GCCA aattagataa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
    C C G A        G      | + | | |     A
  C         G C C G       G G G G G     C
  G           | | |                 T T
  G         A G G C
    T T G A        G     TGTGCCCGGAAGGGCACC
                    C - G
                    T - A
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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