The detailed information of tRNA gene sequence


Sequence ID>W1910727219
Genome IDMGSK01000001
Search identical group
Phylum/ClassUnclassified
SpeciesDeltaproteobacteria bacterium RIFCSPLOWO2_12_FULL_38_8 [MGSK]
Start position on genome 14176
End posion on genome 14275
Amino Acid Sec
Anticodon TCA
Upstream region at tRNA start position 
aatagggtgt
tRNA gene sequence 
GGAAGTGTAAAAGTCTCTGGTGTGCTTCCTGGACTTCAAATCCAGTGGCGGGGATAGTCA
CTATGTCCGCGGTGGGTTCGATTCCCATACACTTCCGCCA
Downstream region at tRNA end position 
atcctttcta
Secondary structure (Cloverleaf model)
>W1910727219	Sec	TCA
                   t      GCCA atcctttcta
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     T - A
                     G - C
                     T - A          T T
                    A     T A C C C     A
      C T C        A      + | | | |     G
    T       T G A A       G T G G G     C
    G       + | | |                 T T
    G       G C T T
      T G T        C     TGGCGGGGATAGTCACTATGTCCGCG
                    C - G
                    T - A
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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