The detailed information of tRNA gene sequence


Sequence ID>W1910727242
Genome IDMGSK01000102
Search identical group
Phylum/ClassDeltaproteobacteria
SpeciesDeltaproteobacteria bacterium RIFCSPLOWO2_12_FULL_38_8 [MGSK]
Start position on genome 22612
End posion on genome 22704
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ttatctctaT
tRNA gene sequence 
GGAGAGGTGGCCGAGCTGGCCGAAGGCGGCGGTTTGCTAAACCGTTATACGGTTAATAGC
CGTATCGTGGGTTCGAATCCCACCCTCTCCGAat
Downstream region at tRNA end position 
ctcggtagaa
Secondary structure (Cloverleaf model)
>W1910727242	Ser	GCT
                   T      GAat ctcggtagaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
    T C G A        G      | | | | |     G
  G         G C C G       G T G G G     C
  G           | | |                 T T
  C         A G G C
    C G A          G     TATACGGTTAATAGCCGTATC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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