The detailed information of tRNA gene sequence


Sequence ID>W1910727442
Genome IDMGSQ01000033
Search identical group
Phylum/ClassUnclassified
SpeciesDeltaproteobacteria bacterium RIFCSPLOWO2_12_FULL_57_22 [MGSQ]
Start position on genome 71
End posion on genome 165
Amino Acid Sec
Anticodon TCA
Upstream region at tRNA start position 
tcaaagtgtt
tRNA gene sequence 
GGAGAAGGAAGGTGCCCGGTGGTGCCGCTGGTCTTCAAAACCAGTCTGGGGGTCGTAAGG
TCCCCGGAGGGTTCGACTCCCTCCCTTCTCCGCCA
Downstream region at tRNA end position 
aaaaaaacag
Secondary structure (Cloverleaf model)
>W1910727442	Sec	TCA
                   t      GCCA aaaaaaacag
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     A - T
                     G - C
                     G - C          T C
                    A     C T C C C     A
      C C C        A      | | | | |     G
    G       G T G G       G A G G G     C
    G       + + | |                 T T
    T       T G C C
      G G          G     TCTGGGGGTCGTAAGGTCCCCG
                    C - G
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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