The detailed information of tRNA gene sequence


Sequence ID>W1910730435
Genome IDMHCH01000005
Search identical group
Phylum/ClassUnclassified
SpeciesCandidatus Chisholmbacteria bacterium RIFCSPHIGHO2_01_FULL_48_12 [MHCH]
Start position on genome 4059
End posion on genome 3974
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
cagtctgatt
tRNA gene sequence 
GGAGGTGTCGGATAGTGGTTCATTCCACACGCTTGGAAAGCGTGCGAGCGTAAGCTCTCG
TGGGTTCGAATCCCACCGCCTCCGCCg
Downstream region at tRNA end position 
cctgtttcag
Secondary structure (Cloverleaf model)
>W1910730435	Ser	GGA
                   t      GCCg cctgtttcag
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     T + G
                     G - C          T A
                    T     C A C C C     A
      T G A        C      | | | | |     G
    G       T A G G       G T G G G     C
    G         | | |                 T T
    T       T T C C
      T C A        A     CGAGCGTAAGCTCTC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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