The detailed information of tRNA gene sequence


Sequence ID>W1910731051
Genome IDMHDJ01000022
Search identical group
Phylum/ClassNitrospinota
SpeciesNitrospinae bacterium RIFCSPHIGHO2_12_FULL_39_42 [MHDJ]
Start position on genome 33230
End posion on genome 33156
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
tttttaacat
tRNA gene sequence 
GGGCGGTTAACTCAGCGGTAGAGTGCCATCCTCACACGGTGGAAGTCGCAGGTTCAAACC
CTGTACCGCCCACCA
Downstream region at tRNA end position 
taataatcga
Secondary structure (Cloverleaf model)
>W1910731051	Val	CAC
                   t      ACCA taataatcga
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C
                     T - A          C A
                    T     T G T C C     A
        G A        A      + | | | |     A
      C     C T C A       G C A G G     C
      G     | | | |                 T T
      G     G A G T
        T A        G     AAGTC
                    C - G
                    C - G
                    A - T
                    T + G
                    C - G
                  C       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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