The detailed information of tRNA gene sequence


Sequence ID>W1910731072
Genome IDMHDJ01000101
Search identical group
Phylum/ClassNitrospinota
SpeciesNitrospinae bacterium RIFCSPHIGHO2_12_FULL_39_42 [MHDJ]
Start position on genome 4238
End posion on genome 4148
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ttgtttttgt
tRNA gene sequence 
GGAGAGGTGGCCGAGCGGCTGAAGGCAACCGCCTGCTAAGCGGTTGTGGGGCAAAACTCC
ACCGAGGGTTCGAATCCCTCCCTCTCCGCCA
Downstream region at tRNA end position 
acaacataac
Secondary structure (Cloverleaf model)
>W1910731072	Ser	GCT
                   t      GCCA acaacataac
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      C G A        G      | | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    C       A G G C
      T G A        A     TGTGGGGCAAAACTCCACC
                    A - T
                    C - G
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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