The detailed information of tRNA gene sequence


Sequence ID>W1910731102
Genome IDMHDK01000136
Search identical group
Phylum/ClassNitrospinota
SpeciesNitrospinae bacterium RIFCSPLOWO2_01_FULL_39_10 [MHDK]
Start position on genome 4248
End posion on genome 4173
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
ttaaaataat
tRNA gene sequence 
GGGGCTGTAGCTCAGCTGGGAGAGCGACAGGCTGGCAGTCTGTAGGTCAGGGGTTCGATC
CCCCTCAGCTCCACCA
Downstream region at tRNA end position 
ctttatcaac
Secondary structure (Cloverleaf model)
>W1910731102	Ala	GGC
                   t      ACCA ctttatcaac
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     T - A
                     G - C          C T
                    T     T C C C C     A
      C G A        A      | | | | |     G
    T       C T C G       A G G G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    A - T
                    C - G
                    A - T
                    G - C
                    G + T
                  C       G
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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