The detailed information of tRNA gene sequence


Sequence ID>W1910731136
Genome IDMHDL01000110
Search identical group
Phylum/ClassNitrospinota
SpeciesNitrospinae bacterium RIFCSPLOWO2_02_39_17 [MHDL]
Start position on genome 3779
End posion on genome 3855
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
aattttaatc
tRNA gene sequence 
CGGGGCGTGGCTCAGCCTGGCAGAGCGTCTGGTTCGGGACCAGAAGGTCGGTGGTTCAAA
TCCACTCGCCCCGACCA
Downstream region at tRNA end position 
ctaaatcaaa
Secondary structure (Cloverleaf model)
>W1910731136	Pro	CGG
                   c      ACCA ctaaatcaaa
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     T C A C C     A
      C G A        G      + | | | |     A
    C       C T C G       G G T G G     C
    T       | | | |                 T T
    G       G A G C
      G C A        G     AGGTC
                    T - A
                    C - G
                    T - A
                    G - C
                    G - C
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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