The detailed information of tRNA gene sequence


Sequence ID>W1910731271
Genome IDMHDO01000143
Search identical group
Phylum/ClassNitrospinota
SpeciesNitrospinae bacterium RIFCSPLOWO2_12_39_16 [MHDO]
Start position on genome 9810
End posion on genome 9734
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
attaggtaac
tRNA gene sequence 
AGGCCAGTAGCTCTAACGGCTAGAGCACCGGACTCCAAATCCGGGTGTTGGGGGTTCAAA
TCCCTCCTGGCCTGCCA
Downstream region at tRNA end position 
atttttttat
Secondary structure (Cloverleaf model)
>W1910731271	Trp	CCA
                   c      GCCA atttttttat
                     A - T
                     G - C
                     G - C
                     C - G
                     C - G
                     A - T
                     G - C          T A
                    T     C T C C C     A
      A A T        A      | + | | |     A
    C       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      C T A        A     GTGTT
                    C - G
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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