The detailed information of tRNA gene sequence


Sequence ID>W1910731309
Genome IDMHDQ01000076
Search identical group
Phylum/ClassNitrospinota
SpeciesNitrospinae bacterium RIFCSPLOWO2_12_FULL_45_22 [MHDQ]
Start position on genome 6030
End posion on genome 6122
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
ttaatttcgt
tRNA gene sequence 
GGAGAGGTGCAAGAGCGGTTTAATTGGCACGCCTGGAGAGCGTGTGGGCGGCTAAAACCT
GCCCCGTGGGTTCGAATCCCACCCTCTCCGCCA
Downstream region at tRNA end position 
tcttaatagt
Secondary structure (Cloverleaf model)
>W1910731309	Ser	GGA
                   t      GCCA tcttaatagt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      C G A        G      | | | | |     G
    G       G A A C       G T G G G     C
    G         | | |                 T T
    T       A T T G
      T T A        G     TGGGCGGCTAAAACCTGCCCC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       G
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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