The detailed information of tRNA gene sequence


Sequence ID>W1910731315
Genome IDMHDQ01000118
Search identical group
Phylum/ClassNitrospinota
SpeciesNitrospinae bacterium RIFCSPLOWO2_12_FULL_45_22 [MHDQ]
Start position on genome 6283
End posion on genome 6371
Amino Acid Leu
Anticodon TAA
Upstream region at tRNA start position 
aatagtagcg
tRNA gene sequence 
GCCGGGGTGGCGGAATTGGTAGACGCAAGGGACTTAAAATCCCTCGGTGTTACTGCACCG
TGCCGGTTCAAGTCCGGCTCCCGGCACCA
Downstream region at tRNA end position 
gaaaaatcaa
Secondary structure (Cloverleaf model)
>W1910731315	Leu	TAA
                   g      ACCA gaaaaatcaa
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C
                     G + T          T G
                    T     C G G C C     A
      T A A        G      | | | | |     A
    T       G G C G       G C C G G     C
    G         | | |                 T T
    G       A C G C
      T A G        A     CGGTGTTACTGCACCGT
                    A - T
                    G - C
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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