The detailed information of tRNA gene sequence


Sequence ID>W1910731343
Genome IDMHDR01000039
Search identical group
Phylum/ClassNitrospinota
SpeciesNitrospinae bacterium RIFCSPLOWO2_12_FULL_47_7 [MHDR]
Start position on genome 2401
End posion on genome 2316
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
gaaagatcgg
tRNA gene sequence 
GGAGAGGTGGCCGAGCGGCTGAAGGCGATTGACTCGAAATCAATTGTCCCCTCTGGGGAC
CGGGGGTTCAAATCCCTCCCTCTCCGttg
Downstream region at tRNA end position 
ttacgcggcc
Secondary structure (Cloverleaf model)
>W1910731343	Ser	CGA
                   g      Gttg ttacgcggcc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      C G A        G      | + | | |     A
    G       G C C G       G G G G G     C
    G         | | |                 T T
    C       A G G C
      T G A        G     TGTCCCCTCTGGGGACC
                    A - T
                    T - A
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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