The detailed information of tRNA gene sequence


Sequence ID>W1910731348
Genome IDMHDR01000104
Search identical group
Phylum/ClassNitrospinota
SpeciesNitrospinae bacterium RIFCSPLOWO2_12_FULL_47_7 [MHDR]
Start position on genome 1078
End posion on genome 1169
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
attgggcatt
tRNA gene sequence 
GGAGAGGTGGCCGAGATGGCTTAAGGCGCACGCCTGCTAAGTGTGTGTAGGTTAATCCCC
TACCGAGGGTTCGAATCCCTCCCTCTCCGCCA
Downstream region at tRNA end position 
ccaaaaaaac
Secondary structure (Cloverleaf model)
>W1910731348	Ser	GCT
                   t      GCCA ccaaaaaaac
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
    T A G A        G      | | | | |     G
  G         G C C G       G A G G G     C
  G           | | |                 T T
  C         A G G C
    T T A          G     TGTAGGTTAATCCCCTACC
                    C - G
                    A - T
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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