The detailed information of tRNA gene sequence


Sequence ID>W1910731485
Genome IDMHEP01000731
Search identical group
Phylum/ClassNitrospirota
SpeciesNitrospirae bacterium RIFCSPHIGHO2_02_FULL_40_19 [MHEP]
Start position on genome 3915
End posion on genome 4004
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
taattatttt
tRNA gene sequence 
GGAGAGGTGGCCGAGCGGTCGAAGGCAGCCGCCTGCTAAGCGGTTGTGGGAGTAAAATCT
CACCCAGGGTTCAAATCCCTGCCTCTCCGCtc
Downstream region at tRNA end position 
tacgagtcat
Secondary structure (Cloverleaf model)
>W1910731485	Ser	GCT
                   t      GCtc tacgagtcat
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     G T C C C     A
      C G A        G      | | | | |     A
    G       G C C G       C A G G G     C
    G         | | |                 T T
    T       A G G C
      C G A        A     TGTGGGAGTAAAATCTCACC
                    G + T
                    C - G
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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