The detailed information of tRNA gene sequence


Sequence ID>W1910731539
Genome IDMHER01000171
Search identical group
Phylum/ClassNitrospirota
SpeciesNitrospirae bacterium RIFCSPLOW2_12_42_9 [MHER]
Start position on genome 13051
End posion on genome 13128
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
attattgtgt
tRNA gene sequence 
GGGGTCGTAGTTCAGCACGGTTAGAACGCCTGCCTGTCACGCAGGAGGTCGCGAGTTCAA
GTCTCGTCGGCCCCGCCA
Downstream region at tRNA end position 
tatatcttaa
Secondary structure (Cloverleaf model)
>W1910731539	Asp	GTC
                   t      GCCA tatatcttaa
                     G - C
                     G - C
                     G - C
                     G - C
                     T + G
                     C - G
                     G - C          T G
                    T     T G C T C     A
    A C G A        A      + | | | |     A
  C         C T T G       G C G A G     C
  G         | | | |                 T T
  G         G A A C
    T T A          G     AGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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