The detailed information of tRNA gene sequence


Sequence ID>W1910731679
Genome IDMHFE01000027
Search identical group
Phylum/ClassUnclassified
SpeciesOmnitrophica bacterium RIFCSPHIGHO2_02_FULL_45_28 [MHFE]
Start position on genome 21278
End posion on genome 21373
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tttaatcggt
tRNA gene sequence 
GGAGAGGTCGCATAGCCCGGTTTAGTGCGGCGGTTTGCTAAACCGCTGTGGTGTTGAAAA
GCGCCACCGGGGGTTCAAATCCCCCCCTCTCCGCCA
Downstream region at tRNA end position 
cttttttgca
Secondary structure (Cloverleaf model)
>W1910731679	Ser	GCT
                   t      GCCA cttttttgca
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C C C C C     A
    C C G A        C      | | | | |     A
  C         T A C G       G G G G G     C
  G         + | | |                 T T
  G         G T G C
    T T T A        G     TGTGGTGTTGAAAAGCGCCACC
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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