The detailed information of tRNA gene sequence


Sequence ID>W1910731811
Genome IDMHFJ01000001
Search identical group
Phylum/ClassUnclassified
SpeciesOmnitrophica bacterium RIFCSPHIGHO2_02_FULL_63_14 [MHFJ]
Start position on genome 5133
End posion on genome 5223
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
tgtttctcta
tRNA gene sequence 
GGAGGAGTGGCTCGAGTGGCTTATGGCGACGGTCTTGAAAACCGTTAGGGCCGCAAGGCC
CTCGCAGGTTCGAATCCTGCCTCCTCCGCCA
Downstream region at tRNA end position 
gtttcggaga
Secondary structure (Cloverleaf model)
>W1910731811	Ser	TGA
                   a      GCCA gtttcggaga
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     A - T
                     G - C          T A
                    T     C G T C C     A
    T G A G        G      | | | | |     G
  G         C T C G       G C A G G     C
  G           + | |                 T T
  C         T G G C
    T T A          G     TAGGGCCGCAAGGCCCTC
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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